DealGPL570: This function deals GPL570 (Affymetrix Human Genome U133 Plus...
In AweKevin/DealGPL570: Dealing GPL570 (Affymetrix Human Genome U133 Plus 2.0 Array) RAW.tar file
Description
Usage
Arguments
Value
Examples
Description
This function deals GPL570 (Affymetrix Human Genome U133 Plus 2.0 Array) RAW.tar file using the robust multi-array average expression measure.
Usage
1
DealGPL570(file, type = "probeIDAndGeneSymbol")
Arguments
file
a file name specified by either a variable of mode character, or a double-quoted string, which is of 'GSE*_RAW.tar' which is of platform GPL570.
type
a character string indicating which type of data frame is to be outputted. One of 'probeIDAndGeneSymbol'(default), 'probeID', or 'geneSymbol'.
Value
a data frame which is a expression profile.
Examples
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file <- system.file("extdata", "GSE104683_RAW.tar", package = "DealGPL570")
file
#Next step would run for about 15s, so you can try it yourself or view the vignettes
## Not run:
result <- DealGPL570(file = file)
## End(Not run)
AweKevin/DealGPL570 documentation built on Nov. 25, 2019, 7:56 a.m.
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Description Usage Arguments Value Examples
Description
This function deals GPL570 (Affymetrix Human Genome U133 Plus 2.0 Array) RAW.tar file using the robust multi-array average expression measure.
Usage
1 | DealGPL570(file, type = "probeIDAndGeneSymbol")
|
Arguments
file |
a file name specified by either a variable of mode character, or a double-quoted string, which is of 'GSE*_RAW.tar' which is of platform GPL570. |
type |
a character string indicating which type of data frame is to be outputted. One of 'probeIDAndGeneSymbol'(default), 'probeID', or 'geneSymbol'. |
Value
a data frame which is a expression profile.
Examples
1 2 3 4 5 6 7 | file <- system.file("extdata", "GSE104683_RAW.tar", package = "DealGPL570")
file
#Next step would run for about 15s, so you can try it yourself or view the vignettes
## Not run:
result <- DealGPL570(file = file)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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