Files in Ax3man/phylopath
Perform Phylogenetic Path Analysis

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md R/DAG.R R/data_docs.R R/internal.R R/phylopath.R R/print_and_plot.R
R/sysdata.rda
README.md
_pkgdown.yml
cran-comments.md
data/cichlids.rda
data/cichlids_tree.rda
data/red_list.rda
data/red_list_tree.rda
data/rhino.rda
data/rhino_tree.rda
docs/articles/binary_models.R
docs/articles/binary_models.html
docs/articles/binary_models_files/figure-html/unnamed-chunk-1-1.png
docs/articles/binary_models_files/figure-html/unnamed-chunk-3-1.png
docs/articles/binary_models_files/figure-html/unnamed-chunk-6-1.png
docs/articles/binary_models_files/figure-html/unnamed-chunk-7-1.png
docs/articles/binary_models_files/figure-html/unnamed-chunk-8-1.png
docs/articles/index.html
docs/articles/intro_to_phylopath.R
docs/articles/intro_to_phylopath.html
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-10-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-11-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-12-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-13-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-14-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-15-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-16-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-4-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-5-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-7-1.png
docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-8-1.png
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/index_files/figure-html/unnamed-chunk-2-1.png
docs/index_files/figure-html/unnamed-chunk-3-1.png
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/DAG-1.png
docs/reference/DAG-10.png
docs/reference/DAG-11.png
docs/reference/DAG-12.png
docs/reference/DAG-13.png
docs/reference/DAG-14.png
docs/reference/DAG-15.png
docs/reference/DAG-16.png
docs/reference/DAG-17.png
docs/reference/DAG-18.png
docs/reference/DAG-19.png
docs/reference/DAG-2.png
docs/reference/DAG-20.png
docs/reference/DAG-21.png
docs/reference/DAG-3.png
docs/reference/DAG-4.png
docs/reference/DAG-5.png
docs/reference/DAG-6.png
docs/reference/DAG-7.png
docs/reference/DAG-8.png
docs/reference/DAG-9.png
docs/reference/DAG.html
docs/reference/average-1.png
docs/reference/average-10.png
docs/reference/average-11.png
docs/reference/average-12.png
docs/reference/average-13.png
docs/reference/average-14.png
docs/reference/average-15.png
docs/reference/average-16.png
docs/reference/average-17.png
docs/reference/average-18.png
docs/reference/average-2.png
docs/reference/average-3.png
docs/reference/average-4.png
docs/reference/average-5.png
docs/reference/average-6.png
docs/reference/average-7.png
docs/reference/average-8.png
docs/reference/average-9.png
docs/reference/average.html
docs/reference/average_DAGs-1.png
docs/reference/average_DAGs-2.png
docs/reference/average_DAGs-3.png
docs/reference/average_DAGs-4.png
docs/reference/average_DAGs-5.png
docs/reference/average_DAGs-6.png
docs/reference/average_DAGs-7.png
docs/reference/average_DAGs.html
docs/reference/best-1.png
docs/reference/best-2.png
docs/reference/best-3.png
docs/reference/best-4.png
docs/reference/best-5.png
docs/reference/best-6.png
docs/reference/best-7.png
docs/reference/best.html
docs/reference/choice-1.png
docs/reference/choice-2.png
docs/reference/choice-3.png
docs/reference/choice-4.png
docs/reference/choice-5.png
docs/reference/choice-6.png
docs/reference/choice-7.png
docs/reference/choice.html
docs/reference/cichlids.html
docs/reference/cichlids_tree.html
docs/reference/coef_plot-1.png
docs/reference/coef_plot-10.png
docs/reference/coef_plot-11.png
docs/reference/coef_plot-12.png
docs/reference/coef_plot-13.png
docs/reference/coef_plot-14.png
docs/reference/coef_plot-15.png
docs/reference/coef_plot-16.png
docs/reference/coef_plot-17.png
docs/reference/coef_plot-18.png
docs/reference/coef_plot-19.png
docs/reference/coef_plot-2.png
docs/reference/coef_plot-20.png
docs/reference/coef_plot-21.png
docs/reference/coef_plot-22.png
docs/reference/coef_plot-23.png
docs/reference/coef_plot-24.png
docs/reference/coef_plot-25.png
docs/reference/coef_plot-26.png
docs/reference/coef_plot-27.png
docs/reference/coef_plot-28.png
docs/reference/coef_plot-3.png
docs/reference/coef_plot-4.png
docs/reference/coef_plot-5.png
docs/reference/coef_plot-6.png
docs/reference/coef_plot-7.png
docs/reference/coef_plot-8.png
docs/reference/coef_plot-9.png
docs/reference/coef_plot.html
docs/reference/define_model_set-1.png
docs/reference/define_model_set.html
docs/reference/est_DAG-1.png
docs/reference/est_DAG-10.png
docs/reference/est_DAG-11.png
docs/reference/est_DAG-12.png
docs/reference/est_DAG-13.png
docs/reference/est_DAG-14.png
docs/reference/est_DAG-2.png
docs/reference/est_DAG-3.png
docs/reference/est_DAG-4.png
docs/reference/est_DAG-5.png
docs/reference/est_DAG-6.png
docs/reference/est_DAG-7.png
docs/reference/est_DAG-8.png
docs/reference/est_DAG-9.png
docs/reference/est_DAG.html
docs/reference/est_DAG_binary.html
docs/reference/index.html
docs/reference/phylo_path.html
docs/reference/phylo_path_binary.html
docs/reference/plot.DAG-1.png
docs/reference/plot.DAG-2.png
docs/reference/plot.DAG-3.png
docs/reference/plot.DAG.html
docs/reference/plot.fitted_DAG-1.png
docs/reference/plot.fitted_DAG-2.png
docs/reference/plot.fitted_DAG-3.png
docs/reference/plot.fitted_DAG.html
docs/reference/plot_model_set-1.png
docs/reference/plot_model_set-10.png
docs/reference/plot_model_set-11.png
docs/reference/plot_model_set-12.png
docs/reference/plot_model_set-13.png
docs/reference/plot_model_set-14.png
docs/reference/plot_model_set-2.png
docs/reference/plot_model_set-3.png
docs/reference/plot_model_set-4.png
docs/reference/plot_model_set-5.png
docs/reference/plot_model_set-6.png
docs/reference/plot_model_set-7.png
docs/reference/plot_model_set-8.png
docs/reference/plot_model_set-9.png
docs/reference/plot_model_set.html
docs/reference/red_list.html
docs/reference/red_list_tree.html
docs/reference/reexports.html
docs/reference/rhino.html
docs/reference/rhino_tree.html
index.Rmd
inst/CITATION
man/DAG.Rd man/average.Rd man/average_DAGs.Rd man/best.Rd man/choice.Rd man/cichlids.Rd man/cichlids_tree.Rd man/coef_plot.Rd man/define_model_set.Rd man/est_DAG.Rd man/phylo_path.Rd man/plot.DAG.Rd man/plot.fitted_DAG.Rd man/plot_model_set.Rd man/red_list.Rd man/red_list_tree.Rd man/rhino.Rd man/rhino_tree.Rd
phylopath.Rproj
vignettes/binary_models.R vignettes/binary_models.Rmd
vignettes/binary_models.html
vignettes/intro_to_phylopath.R vignettes/intro_to_phylopath.Rmd
vignettes/intro_to_phylopath.html
Ax3man/phylopath documentation built on Oct. 1, 2018, 3:09 p.m.