Files in Ax3man/phylopath

Perform Phylogenetic Path Analysis

.Rbuildignore

.gitignore

CRAN-SUBMISSION

DESCRIPTION

NAMESPACE

NEWS.md R/DAG.R R/data_docs.R R/internal.R R/phylopath.R R/print_and_plot.R

R/sysdata.rda

README.md

_pkgdown.yml

cran-comments.md

data/cichlids.rda

data/cichlids_tree.rda

data/red_list.rda

data/red_list_tree.rda

data/rhino.rda

data/rhino_tree.rda

docs/404.html

docs/articles/binary_models.R

docs/articles/binary_models.html

docs/articles/binary_models_files/figure-html/define models-1.png

docs/articles/binary_models_files/figure-html/define_models-1.png

docs/articles/binary_models_files/figure-html/get summary-1.png

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docs/articles/binary_models_files/header-attrs-2.11/header-attrs.js

docs/articles/index.html

docs/articles/intro_to_phylopath.R

docs/articles/intro_to_phylopath.html

docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-10-1.png

docs/articles/intro_to_phylopath_files/figure-html/unnamed-chunk-11-1.png

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docs/articles/intro_to_phylopath_files/header-attrs-2.11/header-attrs.js

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

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docs/jquery.sticky-kit.min.js

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/DAG-1.png

docs/reference/DAG-10.png

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docs/reference/DAG.html

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docs/reference/cichlids.html

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docs/reference/coef_plot.html

docs/reference/define_model_set-1.png

docs/reference/define_model_set.html

docs/reference/est_DAG-1.png

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docs/reference/est_DAG_binary.html

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docs/reference/index.html

docs/reference/phylo_path.html

docs/reference/phylo_path_binary.html

docs/reference/plot.DAG-1.png

docs/reference/plot.DAG-2.png

docs/reference/plot.DAG-3.png

docs/reference/plot.DAG.html

docs/reference/plot.fitted_DAG-1.png

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docs/reference/plot.fitted_DAG-3.png

docs/reference/plot.fitted_DAG.html

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docs/reference/plot_model_set.html

docs/reference/red_list.html

docs/reference/red_list_tree.html

docs/reference/reexports.html

docs/reference/rhino.html

docs/reference/rhino_tree.html

docs/reference/show_warnings.html

docs/sitemap.xml

index.Rmd index.md

inst/CITATION

man/DAG.Rd man/average.Rd man/average_DAGs.Rd man/best.Rd man/choice.Rd man/cichlids.Rd man/cichlids_tree.Rd man/coef_plot.Rd man/define_model_set.Rd man/est_DAG.Rd

man/figures/unnamed-chunk-2-1.png

man/figures/unnamed-chunk-3-1.png

man/phylo_path.Rd man/plot.DAG.Rd man/plot.fitted_DAG.Rd man/plot_model_set.Rd man/red_list.Rd man/red_list_tree.Rd man/rhino.Rd man/rhino_tree.Rd man/show_warnings.Rd

phylopath.Rproj

tests/testthat.R tests/testthat/test-dag.R tests/testthat/test-define_model_set.R vignettes/binary_models.Rmd vignettes/intro_to_phylopath.Rmd

Ax3man/phylopath documentation built on April 5, 2024, 4:54 p.m.