Files in BBCG/ramr
Detection of Rare Aberrantly Methylated Regions in Array and NGS Data
.github/workflows/check-bioc.yml
DESCRIPTION
NAMESPACE
NEWS
R/RcppExports.R
R/getAMR.R
R/getAMR.obsolete.R
R/getUniverse.R
R/internal.R
R/plotAMR.R
R/ramr-data.R
R/simulateAMR.R
R/simulateData.R
R/simulateData.obsolete.R
README.md
_pkgdown.yml
data/ramr.rda
inst/CITATION
inst/unitTests/test_getAMR.R
inst/unitTests/test_getAMR.obsolete.R
inst/unitTests/test_getUniverse.R
inst/unitTests/test_other.R
inst/unitTests/test_plotAMR.R
inst/unitTests/test_simulateAMR.R
inst/unitTests/test_simulateData.R
inst/unitTests/test_simulateData.obsolete.R
man/getAMR.Rd
man/getAMR.obsolete.Rd
man/getUniverse.Rd
man/plotAMR.Rd
man/ramr.data.Rd
man/simulateAMR.Rd
man/simulateData.Rd
man/simulateData.obsolete.Rd
src/Makevars
src/RcppExports.cpp
src/ramr.h
src/rcpp_compute_logp.cpp
src/rcpp_compute_xiqr.cpp
src/rcpp_create_granges.cpp
src/rcpp_filter_threshold.cpp
src/rcpp_fit_beta.cpp
src/rcpp_fit_betabinom.cpp
src/rcpp_fit_binom.cpp
src/rcpp_generate_random_values.cpp
src/rcpp_get_iqr.cpp
src/rcpp_get_meanvar.cpp
src/rcpp_helper_functions.cpp
src/rcpp_prepare_data.cpp
src/rcpp_test_omp.cpp
tests/runTests.R
vignettes/.gitignore
vignettes/amrs.png
vignettes/ramr.Rmd
