fetch_classification_from_worms: Fetches taxonomic classification for a given AphiaID from...
In BLE-LTER/BLE-LTER-utils: Utility functions for BLE LTER IM team
View source: R/check_classification.R
fetch_classification_from_worms R Documentation
Fetches taxonomic classification for a given AphiaID from WoRMS
This function queries the WoRMS API to retrieve taxonomic classification information for a specified AphiaID. If the AphiaID is NA or the fetch fails, it returns NULL with a warning.
The function handles HTTP response errors by warning the user and returns the classification as a list if successful.
Description
Fetches taxonomic classification for a given AphiaID from WoRMS
This function queries the WoRMS API to retrieve taxonomic classification information for a specified AphiaID. If the AphiaID is NA or the fetch fails, it returns NULL with a warning.
The function handles HTTP response errors by warning the user and returns the classification as a list if successful.
Usage
fetch_classification_from_worms(aphia_id)
Arguments
aphia_id
An integer representing the AphiaID for which to fetch the classification.
Value
Returns a list containing the taxonomic levels (Kingdom, Phylum, Class, Order, Family, Genus, Species) of the classification if successful. Returns NULL if the fetch is unsuccessful or if the AphiaID is NA.
BLE-LTER/BLE-LTER-utils documentation built on Jan. 5, 2025, 5:38 p.m.
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View source: R/check_classification.R
| fetch_classification_from_worms | R Documentation |
Fetches taxonomic classification for a given AphiaID from WoRMS This function queries the WoRMS API to retrieve taxonomic classification information for a specified AphiaID. If the AphiaID is NA or the fetch fails, it returns NULL with a warning. The function handles HTTP response errors by warning the user and returns the classification as a list if successful.
Description
Fetches taxonomic classification for a given AphiaID from WoRMS This function queries the WoRMS API to retrieve taxonomic classification information for a specified AphiaID. If the AphiaID is NA or the fetch fails, it returns NULL with a warning. The function handles HTTP response errors by warning the user and returns the classification as a list if successful.
Usage
fetch_classification_from_worms(aphia_id)
Arguments
aphia_id |
An integer representing the AphiaID for which to fetch the classification. |
Value
Returns a list containing the taxonomic levels (Kingdom, Phylum, Class, Order, Family, Genus, Species) of the classification if successful. Returns NULL if the fetch is unsuccessful or if the AphiaID is NA.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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