BMILAB/PASCCA: Cluster analysis of replicated alternative polyadenylation data using shrinkage canonical correlation analysis

PASCCA is an easy-to-use R package for analyses of APA related gene expression, including the characterization of poly(A) sites, quantification of association between genes with/without repeated measurements, clustering of APA-related genes to infer significant APA specific gene modules, and the evaluation of clustering performance with a variety of indexes.

install.packages("remotes")
remotes::install_github("BMILAB/PASCCA")