Files in BMILAB/scAPAtrap
Identification and Quantification of Alternative Polyadenylation Sites from Single-cell RNA-seq Data
DESCRIPTION
LICENSE
Meta/vignette.rds
NAMESPACE
R/scAPAtrap_funlib.R
README.md
changes.log
imgs/scAPAtrap_pipeline.png
inst/doc/movAPA_on_scAPAtrap_results.R
inst/doc/movAPA_on_scAPAtrap_results.Rmd
inst/doc/movAPA_on_scAPAtrap_results.html
inst/doc/movAPA_on_scAPAtrap_results.pdf
inst/doc/scAPAtrap_compare.html
inst/doc/scAPAtrap_tutorial.R
inst/doc/scAPAtrap_tutorial.Rmd
inst/doc/scAPAtrap_tutorial.html
inst/doc/scAPAtrap_tutorial.pdf
man/TRAP.PARAMS.Rd
man/TRAPFILES.Rd
man/convertAPAtrapData.Rd
man/countPeaks.Rd
man/dedupByPos.Rd
man/extractBcAndUb.Rd
man/findPeaks.Rd
man/findPeaksByStrand.Rd
man/findTails.Rd
man/findTailsByPeaks.Rd
man/findUniqueMap.Rd
man/generateAlignBam.Rd
man/generateFinalBam.Rd
man/generateRefIndex.Rd
man/generateSAF.Rd
man/generatescExpMa.Rd
man/initScAPAtrap.Rd
man/loadBpCoverages.Rd
man/reducePeaks.Rd
man/scAPAtrap.Rd
man/separateBamBystrand.Rd
man/setTools.Rd
man/setTrapParams.Rd
vignettes/movAPA_on_scAPAtrap_results.Rmd
vignettes/scAPAtrap_tutorial.Rmd
