concat_dat: Concatenate a .dat file

In BenWilliams-NOAA/groundfishr: What the Package Does (One Line, Title Case)

Concatenate a .dat file

Description

Concatenate a .dat file

Usage

concat_dat(
  year,
  species,
  area = "goa",
  model,
  dat_name,
  rec_age,
  plus_age,
  spawn_mo = 5,
  maturity = NULL,
  n_ageage = 1,
  n_sizeage = 1,
  retro = NULL,
  n_fleets = 1,
  n_ts = NULL,
  n_lls = NULL
)

Arguments

year	assessment year
species	"NORK", "REBS", "SABL"
area	"goa", "bsai", "everywhere"
model	folder that the .tpl will be in
dat_name	what to call the .dat file - ".dat" will be appended to the name
rec_age	recruitment age
plus_age	plus age group
spawn_mo	spawning month
maturity	if maturity is from outside the model (should be placed in user_input folder)
n_ageage	number of age error transmission matrices default is 1
n_sizeage	number of size at age transmission matrices default is 1
retro	not yet implemented
n_fleets	number of fishing fleets e.g., ll fleet, trawl fleet, default is 1
n_ts	number of trawl surveys dafault is 1
n_lls	number of longline surveys e.g., domestic and japanes, default is 1

Examples

concat_dat(year = 2020, species = "NORK",  area = "goa", model = "base", dat_name = "goa_nr", rec_age = 2, plus_age = 45)

BenWilliams-NOAA/groundfishr documentation built on May 11, 2022, 7:41 p.m.