Man pages for BenjaK/scanstatistics
Space-Time Anomaly Detection using Scan Statistics
| closest_subsets | Set of increasing sets from left to right of input vector. |
| connected_neighbors | Find the connected sets for a location and its k nearest... |
| connected_to | Return those elements in the second set which are connected... |
| coords_to_knn | Get the k nearest neighbors for each location, given its... |
| df_to_matrix | Convert a long data frame to a wide matrix. |
| dist_to_knn | Given a distance matrix, find the k nearest neighbors. |
| estimate_baselines | Estimate baselines based on observed counts. |
| estimate_variances | Estimate variances based on observed counts. |
| estimate_zip_params | Estimate the parameters of a ZIP distribution. |
| flexible_zones | Computes the flexibly shaped zones as in Tango (2005). |
| flipud | Flip a matrix upside down |
| get_zero_indices | Get indices of zero elements in a vector. |
| get_zone | Extract a zone from the set of all zones. |
| gumbel_pvalue | Calculate the Gumbel p-value for a scan statistic. |
| has_converged | Is the relative error between two numbers is less than the... |
| if_connected | Return a set of the location and its neighbors if they are... |
| is_connected | Returns TRUE if the neighboring locations are connected to... |
| knn_zones | Find the increasing subsets of k nearest neighbors for all... |
| matrix_to_df | Convert a matrix to a data frame. |
| mc_pvalue | Calculate the Monte Carlo p-value for a scan statistic. |
| NM_geo | Longitude and latitude of New Mexico county seats. |
| NM_map | Data to plot the counties of New Mexico. |
| NM_popcas | Population and brain cancer cases in New Mexico counties... |
| permute_matrix | Permute the entries of the matrix, preserving row and column... |
| powerset_zones | Creates a set of all non-empty subsets of the integers from 1... |
| print.scanstatistic | Print a scanstatistic object. |
| run_scan | Run a scan statistic analysis. |
| scan_bayes_negbin | Calculate the negative binomial bayesian scan statistic.. |
| scan_bayes_negbin_cpp | Calculate the "Bayesian Spatial Scan Statistic" by Neill et... |
| scan_eb_negbin | Calculate the expectation-based negative binomial scan... |
| scan_eb_negbin_cpp | Calculate the expectation-based negative binomial scan... |
| scan_eb_poisson | Calculate the expectation-based Poisson scan statistic. |
| scan_eb_poisson_cpp | Calculate the expecation-based Poisson scan statistic. |
| scan_eb_zip | Calculate the expectation-based ZIP scan statistic. |
| scan_eb_zip_cpp | Calculate the highest-value EB ZIP loglihood ratio statistic. |
| scan_pb_perm_cpp | Calculate the space-time permutation scan statistic. |
| scan_pb_poisson | Calculate the population-based Poisson scan statistic. |
| scan_pb_poisson_cpp | Calculate the population-based Poisson scan statistic. |
| scan_permutation | Calculate the space-time permutation scan statistic. |
| scanstatistics | scanstatistics: Space-time anomaly detection using scan... |
| score_locations | Score each location over zones and duration. |
| top_clusters | Get the top (non-overlappig) clusters. |
