plotCounts: plotCounts
In BenjaminAdelaide/msgbsR: msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Plots the total number of reads vs total number of cut sites per sample
Usage
1
plotCounts(se, cateogory)
Arguments
se
A RangedSummarizedExperiment containing meta data of the samples.
cateogory
The heading name in the sample data to distinguish groups.
Value
Produces a plot showing the total number reads vs total number of cut sites per sample.
Author(s)
Benjamin Mayne
Examples
1
2
data(ratdata2)
plotCounts(se = ratdata2, cateogory = "Group")
BenjaminAdelaide/msgbsR documentation built on May 5, 2019, 2:41 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Plots the total number of reads vs total number of cut sites per sample
Usage
1 | plotCounts(se, cateogory)
|
Arguments
se |
A RangedSummarizedExperiment containing meta data of the samples. |
cateogory |
The heading name in the sample data to distinguish groups. |
Value
Produces a plot showing the total number reads vs total number of cut sites per sample.
Author(s)
Benjamin Mayne
Examples
1 2 | data(ratdata2)
plotCounts(se = ratdata2, cateogory = "Group")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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