update_global_basic_levels: Updates global basic levels in all_basiclevel_na

update_global_basic_levelsR Documentation

Updates global basic levels in all_basiclevel_na

Description

Updates global basic levels in all_basiclevel_na

Usage

update_global_basic_levels(version = NULL)

Arguments

version

Version tag of the all_basiclevel repository.

Loads from the "all_basiclevel" repository:

  • all_basiclevel_na.csv,

  • object_dict and annotid_disambiguation used for mapping objects/tokens to their global basic level.

Then adds a global_bl column to all_basiclevel_na if it can.

If it can, it will return all_basiclevel_na with the new global_bl column.

If it can't, it will throw an error and provide instructions on how to update the global basic level mappings.


BergelsonLab/blabr documentation built on April 19, 2024, 7:21 p.m.