plot_breaklist: Simple plot function for a list of segmentation breakpoints...

In Bierinformatik/consseg: Weighted Reconciliation of Segmentations

Description

Simple plot function for a list of segmentation breakpoints or segment tables.

Usage

plot_breaklist(
  blst,
  n,
  add = FALSE,
  length = 0.05,
  angle = 45,
  code = 3,
  col = 1,
  lwd = 2,
  xlab = "position",
  axis1 = TRUE,
  axis2 = TRUE,
  ...
)

Arguments

blst	a vector of breakpoints (output from consensus), a named list of breakpoint vectors, a named list of data.frames with start and end columns, or a segmenTier results object (class(blst)=="segments").
n	total sequence length (max(unlist(blst)) if not provided).
add	add to existing plot.
length	length of the edges of the arrow head (in inches).
angle	angle from the shaft of the arrow to the edge of the arrow head.
code	integer code, determining kind of arrows to be drawn.
col	arrow colors, a single color or a vector for each segmentation.
lwd	arrow line width.
xlab	x-axis label.
axis1	draw x-axis.
axis2	draw y-axis.
...	further arguments to arrows.

Bierinformatik/consseg documentation built on March 18, 2021, 1:33 p.m.