sRGES_example | R Documentation |

Data of computed example sRGEs for HCC vs liver adjacent tissues on octad.small dataset

sRGES_example

A tibble with 12,442 rows and 6 variables:

- pert_iname
dbl Year price was recorded

- mean
mean sRGES for obtained drug if n>1

- n
times this drug was obtained

- median
median sRGES for drug if n>1

- sd
standart deviation for obtained drug if n>1

- sRGES
sRGES score of the drug

To generate this dataset use the following code from the octad package
load differential expression example for HCC vs adjacent liver tissue computed in `diffExp()`

function from `res_example`

.

`data('res_example',package='octad.db')`

`res=subset(res_example,abs(log2FoldChange)>1&padj<0.001) #load example expression dataset`

`sRGES=runsRGES(res,max_gene_size=100,permutations=1000,output=FALSE)`

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.