get_samplename_from_rsem_file: Get the sample name from the RSEM output file.
In Bio-Core/BioCore.CAMs: BioCore Clinicall Aggressive Meningiomas (CAMs) R Package
Description
Usage
Arguments
Value
Author(s)
Examples
Description
A function that extracts the sample name from the RSEM output file. The format is usually: <samplename>.genes.results
Usage
1
get_samplename_from_rsem_file(file = NULL, pattern = ".genes.results")
Arguments
file
RSEM filename (required)
pattern
pattern in file to extract and remove (optional, default: .genes.results)
Value
Returns a string containing the sample name.
Author(s)
Richard J. de Borja <richard.deborja@uhnresearch.ca>
Examples
1
samplename <- get_samplename_from_rsem_file(file="S1.genes.results")
Bio-Core/BioCore.CAMs documentation built on May 30, 2019, 6:10 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
A function that extracts the sample name from the RSEM output file. The format is usually: <samplename>.genes.results
Usage
1 | get_samplename_from_rsem_file(file = NULL, pattern = ".genes.results")
|
Arguments
file |
RSEM filename (required) |
pattern |
pattern in file to extract and remove (optional, default: .genes.results) |
Value
Returns a string containing the sample name.
Author(s)
Richard J. de Borja <richard.deborja@uhnresearch.ca>
Examples
1 | samplename <- get_samplename_from_rsem_file(file="S1.genes.results")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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