labguru_ic50_analysis: Labguru ic50 Analysis

In BioData/LabguruR: Labguru API wrapper for R

Labguru ic50 Analysis

Description

Download plate from labguru server and run ic50 analysis.

Usage

labguru_ic50_analysis(
  plate_id,
  indir = ".",
  outdir_plate = "./plate",
  outdir_results = "./results",
  plates = 2,
  inhib = NULL,
  normalize = "single",
  graphics = "mean",
  img_png = TRUE,
  server = Sys.getenv("LABGURU_SERVER"),
  token = Sys.getenv("LABGURU_TOKEN")
)

Arguments

plate_id	numeric(1) plate id of the plate from labguru server
indir	character(1) argument of ic50::ic50() function with same the name
outdir_plate	character(1) directory name where to store plate data
outdir_results	character(1) argument of ic50::ic50() function with the name outdir
plates	numeric(1) argument of ic50::ic50() function with same the name
inhib	numeric(1) argument of ic50::ic50() function with same the name
normalize	character(1) argument of ic50::ic50() function with same the name
graphics	character(1) argument of ic50::ic50() function with same the name
img_png	logical(1) TRUE (default) to create single images from the pdf result, magick package is required for TRUE.
server	character(1) indicating the server URL
token	character(1) access token for API authentication

Examples

if(requireNamespace("ic50", quietly = TRUE)){
 ic50lgres <- labguru_ic50_analysis()
}

BioData/LabguruR documentation built on May 11, 2022, 11:46 p.m.