TDm6A_application: <TDm6A_application>
In BioDataLearning/TDm6A: Prediction of m6A modifications in human cells
View source: R/TDm6A_application.R
Description
This function is used to apply TDm6A models to predict m6A sites on a given nucleotide sequence
Usage
1
TDm6A_application(faFile_Input, plot_Output, csvFile_Output, cellType)
Arguments
faFile_Input
full path of the input fasta file storing the ID and sequence information
plot_Output
full path of the output .png file to show the predicted m6A sites on the given sequence
csvFile_Output
full path of the output .csv file to store the predicted results
cellType
a string to be "A549", or "CD8T", or "HEK293"
BioDataLearning/TDm6A documentation built on March 18, 2020, 9:49 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/TDm6A_application.R
Description
This function is used to apply TDm6A models to predict m6A sites on a given nucleotide sequence
Usage
1 | TDm6A_application(faFile_Input, plot_Output, csvFile_Output, cellType)
|
Arguments
faFile_Input |
full path of the input fasta file storing the ID and sequence information |
plot_Output |
full path of the output .png file to show the predicted m6A sites on the given sequence |
csvFile_Output |
full path of the output .csv file to store the predicted results |
cellType |
a string to be "A549", or "CD8T", or "HEK293" |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.