API for Bioconductor/AnVIL
Bioconductor on the AnVIL compute environment
| Global functions | |
|---|---|
| $,Service-method | Man page |
| .DollarNames.Service | Man page Source code |
| .api | Source code |
| .api_args | Source code |
| .api_body | Source code |
| .api_get_accept | Source code |
| .api_get_config | Source code |
| .api_get_content_type | Source code |
| .api_get_message_body | Source code |
| .api_get_operations | Source code |
| .api_get_url | Source code |
| .api_header | Source code |
| .api_is_message_body_parameter | Source code |
| .api_path | Source code |
| .api_paths_fix | Source code |
| .api_test_check | Source code |
| .api_test_file_path | Source code |
| .api_test_in_use | Source code |
| .api_test_write | Source code |
| .avbucket_path | Source code |
| .avnotebooks_runtime_path | Source code |
| .avnotebooks_workspace_path | Source code |
| .avstop_for_status | Source code |
| .avtable_import | Source code |
| .avtable_import_chunks | Source code |
| .avtable_import_pages_index | Source code |
| .avtable_import_set_entity | Source code |
| .avtable_import_write_dataset | Source code |
| .avtable_na | Source code |
| .avtable_paged1 | Source code |
| .avtable_pages | Source code |
| .avworkflow_MethodRepoMethod_validate | Source code |
| .avworkflow_configuration_set_validate_response | Source code |
| .avworkflow_configuration_template_io | Source code |
| .avworkflow_file_type | Source code |
| .avworkflow_files_from_api | Source code |
| .avworkflow_files_from_submissionId | Source code |
| .avworkflow_files_from_submissionRoot | Source code |
| .avworkflow_job | Source code |
| .avworkflow_response | Source code |
| .avworkspaces_clean | Source code |
| .config | Source code |
| .drs_access_url | Source code |
| .drs_access_url_1 | Source code |
| .drs_is_uri | Source code |
| .drs_stat_impl | Source code |
| .gadget_renderDT | Source code |
| .gadget_run | Man page Source code |
| .gadget_server | Source code |
| .gadget_ui | Source code |
| .gcloud_access_token_new | Source code |
| .gcloud_do | Source code |
| .gcloud_get_value_check | Source code |
| .gcloud_sdk_do | Source code |
| .gcloud_sdk_find_binary | Source code |
| .gcloud_sdk_getenv | Source code |
| .gcloud_sdk_result | Source code |
| .gsutil_do | Source code |
| .gsutil_exists_1 | Source code |
| .gsutil_is_uri | Source code |
| .gsutil_requesterpays_flag | Source code |
| .gsutil_sh_quote | Source code |
| .is_avtable | Source code |
| .is_character | Source code |
| .is_character_0_or_1 | Source code |
| .is_https | Source code |
| .is_local_directory | Source code |
| .is_scalar_character | Source code |
| .is_scalar_character_or_NULL | Source code |
| .is_scalar_integer | Source code |
| .is_scalar_logical | Source code |
| .is_scalar_numeric | Source code |
| .is_workspace | Source code |
| .martha_v3 | Source code |
| .onLoad | Source code |
| .operation_field | Source code |
| .pretty | Source code |
| .pretty_text | Source code |
| .repository | Source code |
| .repository_container_version | Source code |
| .repository_container_version_test | Source code |
| .repository_stats_package_format | Source code |
| .runtime_pet | Source code |
| .service | Source code |
| .service_validate_md5sum | Source code |
| .tbl_with_template | Source code |
| .workspace_get | Source code |
| .workspace_impl | Source code |
| AnVIL-deprecated | Man page |
| BINARY_BASE_URL | Man page |
| Dockstore | Man page Source code |
| Dockstore-class | Man page |
| Gen3Fence | Man page Source code |
| Gen3Indexd | Man page Source code |
| Gen3Peregrine | Man page Source code |
| Gen3Sheepdog | Man page Source code |
| Leonardo | Man page Source code |
| Leonardo-class | Man page |
| Rawls | Man page Source code |
| Rawls-class | Man page |
| Response | Man page |
| Service | Man page Source code |
| Service-class | Man page |
| Services | Man page |
| Terra | Man page Source code |
| Terra-class | Man page |
| add_libpaths | Man page Source code |
| as.list.response | Man page Source code |
| authenticate | Source code |
| authenticate_config | Source code |
| authenticate_ok | Source code |
| authenticate_path | Source code |
| av | Man page |
| avbucket | Man page Source code |
| avdata | Man page Source code |
| avdata_import | Man page Source code |
| avdisks | Man page Source code |
| avfiles_backup | Man page Source code |
| avfiles_ls | Man page Source code |
| avfiles_restore | Man page Source code |
| avfiles_rm | Man page Source code |
| avnotebooks | Man page Source code |
| avnotebooks_delocalize | Man page Source code |
| avnotebooks_localize | Man page Source code |
| avruntime | Man page Source code |
| avruntimes | Man page Source code |
| avtable | Man page Source code |
| avtable_delete_values | Man page Source code |
| avtable_gadget | Man page Source code |
| avtable_import | Man page Source code |
| avtable_import_set | Man page Source code |
| avtable_import_status | Man page Source code |
| avtable_paged | Man page Source code |
| avtables | Man page Source code |
| avworkflow | Man page Source code |
| avworkflow_configuration | Man page Source code |
| avworkflow_configuration_get | Man page Source code |
| avworkflow_configuration_inputs | Man page Source code |
| avworkflow_configuration_outputs | Man page Source code |
| avworkflow_configuration_set | Man page Source code |
| avworkflow_configuration_template | Man page Source code |
| avworkflow_configuration_update | Man page Source code |
| avworkflow_configurations | Man page |
| avworkflow_files | Man page Source code |
| avworkflow_gadget | Man page Source code |
| avworkflow_import_configuration | Man page Source code |
| avworkflow_jobs | Man page Source code |
| avworkflow_localize | Man page Source code |
| avworkflow_name | Man page Source code |
| avworkflow_namespace | Man page Source code |
| avworkflow_run | Man page Source code |
| avworkflow_stop | Man page Source code |
| avworkflows | Man page Source code |
| avworkspace | Man page Source code |
| avworkspace_clone | Man page Source code |
| avworkspace_gadget | Man page Source code |
| avworkspace_name | Man page Source code |
| avworkspace_namespace | Man page Source code |
| avworkspaces | Man page Source code |
| browse_workspace | Man page Source code |
| delocalize | Man page Source code |
| drs_access_url | Man page Source code |
| drs_cp | Man page Source code |
| drs_cp.character | Source code |
| drs_cp.drs_stat_tbl | Source code |
| drs_stat | Man page Source code |
| empty_object | Man page |
| flatten | Man page |
| flatten,response-method | Man page |
| gcloud | Man page |
| gcloud_account | Man page Source code |
| gcloud_cmd | Man page Source code |
| gcloud_exists | Man page Source code |
| gcloud_help | Man page Source code |
| gcloud_project | Man page Source code |
| gsutil | Man page |
| gsutil_cat | Man page Source code |
| gsutil_cp | Man page Source code |
| gsutil_exists | Man page Source code |
| gsutil_help | Man page Source code |
| gsutil_ls | Man page Source code |
| gsutil_pipe | Man page Source code |
| gsutil_requesterpays | Man page Source code |
| gsutil_rm | Man page Source code |
| gsutil_rsync | Man page Source code |
| gsutil_stat | Man page Source code |
| install | Man page Source code |
| localize | Man page Source code |
| operations | Man page |
| operations,Dockstore-method | Man page |
| operations,Leonardo-method | Man page |
| operations,Rawls-method | Man page |
| operations,Service-method | Man page |
| operations,Terra-method | Man page |
| print.avworkflow_configuration | Man page Source code |
| print.gcloud_sdk_result | Source code |
| print.repository_stats | Man page Source code |
| repositories | Man page Source code |
| repository | Man page Source code |
| repository_stats | Man page Source code |
| schemas | Man page |
| schemas,Rawls-method | Man page |
| schemas,Service-method | Man page |
| schemas,Terra-method | Man page |
| show,Service-method | Man page |
| str,response-method | Man page |
| tags | Man page Source code |
