makeGOGraph: A convenience function to generate graphs based on the GO.db...
In Bioconductor/AnnotationDbi: Manipulation of SQLite-based annotations in Bioconductor
makeGOGraph R Documentation
A convenience function to generate graphs based on the GO.db package
Description
makeGOGraph is a function to quickly convert any of the three Gene
Ontologies in GO.db into a graphNEL object where each edge is given a
weight of 1.
Usage
makeGOGraph(ont = c("bp","mf","cc"))
Arguments
ont
Specifies the ontology: "cc", "bp" or "mf".
Author(s)
Marc Carlson
See Also
GOTerms
Examples
## makes a GO graph from the CC ontology
f <- makeGOGraph("cc")
Bioconductor/AnnotationDbi documentation built on Nov. 2, 2024, 6:27 a.m.
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| makeGOGraph | R Documentation |
A convenience function to generate graphs based on the GO.db package
Description
makeGOGraph is a function to quickly convert any of the three Gene
Ontologies in GO.db into a graphNEL object where each edge is given a
weight of 1.
Usage
makeGOGraph(ont = c("bp","mf","cc"))
Arguments
ont |
Specifies the ontology: "cc", "bp" or "mf". |
Author(s)
Marc Carlson
See Also
GOTerms
Examples
## makes a GO graph from the CC ontology
f <- makeGOGraph("cc")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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