API for Bioconductor/AnnotationHub
Client to access AnnotationHub resources
| Global functions | |
|---|---|
| $,Hub-method | Man page |
| .DollarNames.Hub | Source code |
| .Hub | Man page Source code |
| .Hub_get1 | Source code |
| .IdsInfo | Source code |
| .ask | Source code |
| .biocVersionDate | Source code |
| .cache_download_ok | Source code |
| .cache_internal | Source code |
| .collapse_as_list | Source code |
| .collapse_as_string | Source code |
| .count_join_resources | Source code |
| .count_resources | Source code |
| .create_cache | Source code |
| .dataclass | Source code |
| .datapathIds | Source code |
| .db_clean_index | Source code |
| .db_close | Man page Source code |
| .db_create_index | Source code |
| .db_index | Source code |
| .db_index_file | Source code |
| .db_index_load | Source code |
| .db_is_valid | Source code |
| .db_open | Source code |
| .db_query | Source code |
| .db_uid | Source code |
| .db_uid0 | Source code |
| .get_cache | Source code |
| .guessIsCircular | Source code |
| .gunzip | Source code |
| .httr_proxy | Source code |
| .hub_cache_resource | Source code |
| .hub_data_path | Source code |
| .hub_option_key | Source code |
| .hub_resource | Source code |
| .hub_resource_path | Source code |
| .id_as_single_string | Source code |
| .makeGrFromCharacterString | Source code |
| .mapAbbr2FullName | Source code |
| .metadataForAH | Source code |
| .named_cache_path | Source code |
| .onLoad | Source code |
| .possibleDates | Source code |
| .pprintf0 | Source code |
| .pprintf1 | Source code |
| .query_as_data.frame | Source code |
| .rdataclass | Source code |
| .rdatapath | Source code |
| .require | Source code |
| .resource_column | Source code |
| .resource_columns | Source code |
| .resource_table | Source code |
| .restrictDateByVersion | Source code |
| .show | Source code |
| .show1 | Source code |
| .sourcelastmodifieddate | Source code |
| .sourcesize | Source code |
| .sourcetype | Source code |
| .sourceurl | Source code |
| .subsethub | Source code |
| .tags | Source code |
| .tidyGRanges | Source code |
| .title_data.frame | Source code |
| .uid0 | Source code |
| .updateEntry | Source code |
| .updateHubDB | Source code |
| .updateObject | Source code |
| .valid.Hub | Source code |
| AnnotationHub | Man page Source code |
| AnnotationHub-class | Man page |
| AnnotationHub-package | Man page |
| AnnotationHubResource-class | Man page |
| DispatchClassList | Man page Source code |
| Hub-class | Man page |
| Hub-utils | Man page |
| [,Hub,character,missing-method | Man page |
| [,Hub,logical,missing-method | Man page |
| [,Hub,numeric,missing-method | Man page |
| [<-,Hub,character,missing,Hub-method | Man page |
| [<-,Hub,logical,missing,Hub-method | Man page |
| [<-,Hub,numeric,missing,Hub-method | Man page |
| [[,Hub,character,missing-method | Man page |
| [[,Hub,numeric,missing-method | Man page |
| `.db_index<-` | Source code |
| `.db_uid<-` | Source code |
| as.list,Hub-method | Man page |
| as.list.Hub | Man page Source code |
| c,Hub-method | Man page |
| cache | Man page |
| cache,AnnotationHub-method | Man page |
| cache,Hub-method | Man page |
| cache<- | Man page |
| cache<-,Hub-method | Man page |
| class:AnnotationHub | Man page |
| class:AnnotationHubResource | Man page |
| class:Hub | Man page |
| convertHub | Man page Source code |
| dbconn,Hub-method | Man page |
| dbfile,Hub-method | Man page |
| fileName,Hub-method | Man page |
| getAnnotationHubOption | Man page Source code |
| getHub | Man page |
| getHub,AnnotationHubResource-method | Man page |
| getInfoOnIds | Man page |
| getInfoOnIds,character-method | Man page |
| getInfoOnIds,missing-method | Man page |
| getInfoOnIds,numeric-method | Man page |
| getSize | Source code |
| hubCache | Man page |
| hubCache,AnnotationHubResource-method | Man page |
| hubCache,Hub-method | Man page |
| hubDate | Man page |
| hubDate,Hub-method | Man page |
| hubUrl | Man page |
| hubUrl,AnnotationHubResource-method | Man page |
| hubUrl,Hub-method | Man page |
| isLocalHub | Man page |
| isLocalHub,AnnotationHubResource-method | Man page |
| isLocalHub,Hub-method | Man page |
| isLocalHub<- | Man page |
| isLocalHub<-,Hub-method | Man page |
| length,Hub-method | Man page |
| listResources | Man page |
| loadResources | Man page |
| mcols,Hub-method | Man page |
| names,Hub-method | Man page |
| package | Man page |
| package,Hub-method | Man page |
| possibleDates | Man page Source code |
| query | Man page |
| query,Hub-method | Man page |
| recordStatus | Man page |
| recordStatus,Hub-method | Man page |
| refreshHub | Man page Source code |
| removeCache | Man page Source code |
| removeResources | Man page |
| removeResources,character-method | Man page |
| removeResources,missing-method | Man page |
| setAnnotationHubOption | Man page Source code |
| show,AnnotationHubResource-method | Man page |
| show,Hub-method | Man page |
| snapshotDate | Man page |
| snapshotDate,Hub-method | Man page |
| snapshotDate<- | Man page |
| snapshotDate<-,Hub-method | Man page |
| subset,Hub-method | Man page |
| utilities | Man page |
| utils | Man page |
