BiocUpgrade: Upgrade Bioconductor to the latest version available for this...

In Bioconductor/BiocInstaller: Install/Update Bioconductor, CRAN, and github Packages

Description

Downloads the latest version of the BiocInstaller package, and upgrades all currently installed packages to the latest repositories for this version of R.

To upgrade, use:

    ## 'http' if 'https' unavailable
    source("https://bioconductor.org/biocLite.R")
    biocLite("BiocUpgrade")
  

See Also

biocLite Installs/updates Bioconductor/CRAN packages.

chooseBioCmirror lets you choose from a list of all public Bioconductor mirror URLs.

chooseCRANmirror lets you choose from a list of all public CRAN mirror URLs.

biocinstallRepos returns the Bioconductor and CRAN repositories used by biocLite.

install.packages installs the packages themselves.

Examples

## Not run: 
source("https://bioconductor.org/biocLite.R")
biocLite("BiocUpgrade")

## End(Not run)

Bioconductor/BiocInstaller documentation built on May 31, 2019, 2:43 p.m.