NEWS.md
In Bioconductor/GenomicDataCommons: NIH / NCI Genomic Data Commons Access
Changes in version 1.28.0
- Defunct legacy function, methods, endpoints, and arguments (@LiNk-NY)
Changes in version 1.26.0
New features
- The GDC API has deprecated the legacy endpoint (#110, @LiNk-NY)
Changes in version 1.24.0
Bug fixes and minor improvements
gdc_clinical handles NULL responses when diagnoses are not available for
all IDs queried (#109, @zx8754).- Minor updates to somatic mutations vignette and unit tests.
Changes in version 1.20.0
New features
gdcdata has an ellipses argument to download data from the legacy archive,
e.g., legacy = TRUE (#84, @LiNk-NY)missing (is MISSING) and !missing (NOT MISSING) operations implemented
for filtering queries, see vignette (#96, @LiNk-NY)gdc-client version can be validated against last known good version based on
data release (#99, @LiNk-NY)
Bug fixes and minor improvements
gdc_clinical uses readr::type_convert to handle columns with inconsistent
types from the API.- update examples in documentation and vignette based on new data release
Bioconductor/GenomicDataCommons documentation built on May 2, 2024, 4:21 p.m.
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Changes in version 1.28.0
- Defunct legacy function, methods, endpoints, and arguments (@LiNk-NY)
Changes in version 1.26.0
New features
- The GDC API has deprecated the legacy endpoint (#110, @LiNk-NY)
Changes in version 1.24.0
Bug fixes and minor improvements
gdc_clinicalhandlesNULLresponses when diagnoses are not available for all IDs queried (#109, @zx8754).- Minor updates to somatic mutations vignette and unit tests.
Changes in version 1.20.0
New features
gdcdatahas an ellipses argument to download data from the legacy archive, e.g.,legacy = TRUE(#84, @LiNk-NY)missing(is MISSING) and!missing(NOT MISSING) operations implemented for filtering queries, see vignette (#96, @LiNk-NY)gdc-clientversion can be validated against last known good version based on data release (#99, @LiNk-NY)
Bug fixes and minor improvements
gdc_clinicalusesreadr::type_convertto handle columns with inconsistent types from the API.- update examples in documentation and vignette based on new data release
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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