API for Bioconductor/Organism.dplyr
dplyr-based Access to Bioconductor Annotation Resources

Global functions
.add_view Source code
.alter_ensembl_ids Source code
.alter_table Source code
.byFun Source code
.checkCompatibleStartEnds Source code
.checkDepth Source code
.check_filters Source code
.cleanOutput Source code
.deleteTempTables Source code
.fieldToClass Source code
.fields Source code
.filterByKeys Source code
.filterFactory Source code
.filter_init Source code
.filter_list Source code
.filter_names Source code
.findPkg Source code
.findTable Source code
.fullJoin Source code
.getAllTableValues Source code
.getFields Source code
.getSeqinfo Source code
.get_ensembl_id_len Source code
.innerJoin Source code
.is_columns_afl Source code
.iterTable Source code
.leftJoin Source code
.onLoad Source code
.selectColumns Source code
.src_organism_dbpath Source code
.supportedFilters Source code
.tableNames Source code
.tblFunctions Source code
.tblFunctionsBy_UTR Source code
.tbl_join Source code
.toGRanges Source code
.updateSeqinfo Source code
.valid_condition Source code
.xscripts Source code
.xscriptsBy_tbl Source code
.xscripts_tbl Source code
AccnumFilter Man page
AliasFilter Man page
BasicFilter-class Man page
CdsChromFilter Man page
CdsIdFilter Man page
CdsNameFilter Man page
CdsStrandFilter Man page
CharacterFilter-class Man page
EnsemblFilter Man page
EnsemblprotFilter Man page
EnsembltransFilter Man page
EnzymeFilter Man page
EvidenceFilter Man page
EvidenceallFilter Man page
ExonChromFilter Man page
ExonStrandFilter Man page
FlybaseCgFilter Man page
FlybaseFilter Man page
FlybaseProtFilter Man page
GeneChromFilter Man page
GeneStrandFilter Man page
Genomic-Extractors Man page
GoFilter Man page
GoallFilter Man page
IntegerFilter-class Man page
IpiFilter Man page
MapFilter Man page
MgiFilter Man page
OmimFilter Man page
OntologyFilter Man page
OntologyallFilter Man page
PfamFilter Man page
PmidFilter Man page
PrositeFilter Man page
RefseqFilter Man page
TxChromFilter Man page
TxStrandFilter Man page
TxTypeFilter Man page
UnigeneFilter Man page
WormbaseFilter Man page
ZfinFilter Man page
cds Man page
cdsBy Man page
cdsBy_tbl Man page
cds_tbl Man page
columns,src_organism-method Man page
exons Man page
exonsBy Man page
exonsBy_tbl Man page
exons_tbl Man page
fiveUTRsByTranscript Man page
fiveUTRsByTranscript_tbl Man page
genes Man page
genes_tbl Man page
hg38light Man page Source code
intronsByTranscript Man page
intronsByTranscript,src_organism-method Man page
intronsByTranscript_tbl Man page Source code
keys,src_organism-method Man page
keytypes,src_organism-method Man page
mapIds,src_organism-method Man page
mm10light Man page Source code
orgPackageName,src_organism-method Man page
promoters Man page
promoters,src_organism-method Man page
promoters_tbl Man page Source code
select,src_organism-method Man page
select_.tbl_organism Man page Source code
select_tbl Man page
seqinfo,src_organism-method Man page
show,BasicFilter-method Man page
show,CharacterFilter-method Man page
show,IntegerFilter-method Man page
src_organism Man page Source code
src_tbls.src_organism Man page Source code
src_ucsc Man page Source code
supportedFilters,src_organism-method Man page
supportedOrganisms Man page Source code
tbl.src_organism Man page Source code
threeUTRsByTranscript Man page
threeUTRsByTranscript_tbl Man page
transcripts Man page
transcriptsBy Man page
transcriptsBy_tbl Man page
transcripts_tbl Man page
Bioconductor/Organism.dplyr documentation built on Nov. 6, 2019, 7:04 a.m.