ZarrExperiment: ZarrExperiment constructor function

In Bioconductor/ZarrExperiment: Manipulate Zarr archives as R objects

ZarrExperiment constructor function

Description

The 'ZarrExperiment' class is a matrix-like container where rows represent features and columns samples, similar to the SummarizedExperiment container.

Usage

ZarrExperiment(zarrchive, ...)

Arguments

zarrchive	Either a ZarrArchive class or path to the top level of a Zarr archive.
...	Additional arguments passed to the 'SingleCellExperiment' constructor function

Examples

fl <- system.file(
    package="ZarrExperiment", "extdata",
    "stahl-2016-science-olfactory-bulb.matrix.zarr"
)

ZarrExperiment(fl)

ZarrExperiment(
    ZarrArchive(fl)
)

Bioconductor/ZarrExperiment documentation built on Oct. 25, 2022, 7:41 a.m.