loadConvertMultiFCS: Loads multiple FCS files at once

In BodenmillerGroup/bbRtools: A helper package to for cyTOF R scripts

Description

Loads multiple FCS files at once

Usage

loadConvertMultiFCS(fileList = NaN, fileDir = NaN, condDict = NaN,
  subSample = NA, subSampleMode = "number", preprocessfkt = NULL)

Arguments

fileList	Vector of filename to be loaded. If NaN all fcs files are loaded
fileDir	the base directory for the files or a directory with FCS files
condDict	a named vector which maps Filenames to condition

Value

a data/tab;e with all combined FCS files

This is a good way to load a whole directory of files (if fileList=NaN). If a condition dictionary (condDict) is provided, the 'condition' column will be equal to the conditions. Otherwise it will be the filename used.

BodenmillerGroup/bbRtools documentation built on May 20, 2020, 1:36 a.m.