In Bohdan-Khomtchouk/peaX: Human ChIP-seq peaks data from ENCODE and ROADMAP Epigenomics

peaX is a data package that provides human transcription factor and histone modification ChIP-seq peaks data from ENCODE and ROADMAP Epigenomics.

Currently supported ChIP-seq peak lists in the peaX package include:

1) Proximal, distal, and total peak sets for H3K4me1 2) Proximal, distal, and total peak sets for H3K4me3 3) Proximal, distal, and total peak sets for H3K9ac 4) Proximal, distal, and total peak sets for H3K27ac 5) Proximal, distal, and total peak sets for transcription factors

For more information on a specific ChIP-seq dataset, please refer to the package documentation, e.g.:

library(peaX)
?H3K4me3_total

Bohdan-Khomtchouk/peaX documentation built on May 8, 2019, 3:41 p.m.