BushmanLab/LDppA: Latent Dirichlet Process Prior Allocation for Cell Type Compositions
Version 0.99.39

Cell type compositions are estimated from gene therapy data. The data are in the form of a N by K table of counts for number of cells in each of N cell lineages for which K types are assessed. The model uses a Dirchlet process prior that has a Dirichlet distribution as its base. The K cell types are subject to misclassification and a confusion matrix must be given a priori.

Getting started

Package details

AuthorCharles C. Berry [aut, cre]
Maintainer"Charles C. Berry" <[email protected]>
LicenseGPL-3 | file LICENSE
Version0.99.39
URL https://github.com/BushmanLab/LDppA.git
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("BushmanLab/LDppA")
BushmanLab/LDppA documentation built on June 1, 2017, 10:03 p.m.