cellTypeCompositions-package: cellTypeCompositions: Cell Type Compositions Gibbs Sampler
In BushmanLab/cellTypeCompositions: Cell Type Compositions Gibbs Sampler
cellTypeCompositions-package R Documentation
cellTypeCompositions: Cell Type Compositions Gibbs Sampler
Description
Estimate cell type compositions from a table of clone
by cell type counts. Functions are provided for exploring the cell
type compositions that are displayed by cell lineages. The
workhorse is a function that performs blocked Gibbs sampling on the
cell type frequencies in a parent population under a model that
assumes a vague prior for the total number of cells and a uniform
Dirichlet prior for the proportions fo different cell types.
Details
The only functions you're likely to need from cellTypeCompositions is
gibbsScan and its update method
BushmanLab/cellTypeCompositions documentation built on June 14, 2022, 9:29 p.m.
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| cellTypeCompositions-package | R Documentation |
cellTypeCompositions: Cell Type Compositions Gibbs Sampler
Description
Estimate cell type compositions from a table of clone by cell type counts. Functions are provided for exploring the cell type compositions that are displayed by cell lineages. The workhorse is a function that performs blocked Gibbs sampling on the cell type frequencies in a parent population under a model that assumes a vague prior for the total number of cells and a uniform Dirichlet prior for the proportions fo different cell types.
Details
The only functions you're likely to need from cellTypeCompositions is
gibbsScan and its update method
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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