Files in CBDRH/covidrecon

Pulls and Analyses COVID data

NEWS.md R/aa-utils.R R/add-country-row-id.R R/add-weekly-avg.R R/changepoint.R R/country-global-incidence.R R/country-over-limit.R R/cutting-room.R R/estimate-instant-reproduction.R R/ggplot-helpers.R R/global-vars.R R/high-incidence.R R/observed-time-to-double.R R/patch-data.R R/pull-covid-cdc.R R/pull-covid-jhu.R R/summarise-cases.R R/utils-pipe.R R/when-all-gt-zero.R README.Rmd README.md man/add_country_hit_limit.Rd man/add_country_label.Rd man/add_country_row_id.Rd man/add_covid_change_point.Rd man/add_days_since_limit.Rd man/add_instant_reproduction.Rd man/add_weekly_avg.Rd man/augment_estimate_repro.Rd man/country_repro_errors.Rd man/covid-estimate-repro.Rd man/covid_change_point.Rd man/covid_ecdc.Rd man/covid_estimate_repro.Rd man/covid_high_incidence.Rd man/covid_highlight_australia_plus.Rd man/covid_jhu.Rd man/covid_jhu_clean_names.Rd man/covid_jhu_filter_countres.Rd man/covid_jhu_pivot_longer.Rd man/covid_jhu_read.Rd man/covid_latest.Rd man/covid_prepare_estimate_repro.Rd man/covid_summarise_doubling.Rd man/diff_days.Rd man/effective-repro.Rd man/extract_change_point_mean_var.Rd man/extract_first_np_change_point.Rd man/filter_country_over_limit.Rd man/geom_covid_country_label.Rd man/gg-covid.Rd man/gg_covid_cumulative_cases_deaths_exceed_limit.Rd man/gg_covid_cumulative_exceed_limit.Rd man/gg_covid_incidence_exceed_limit.Rd man/gg_effective_repro_incidence_patchwork.Rd man/gt-zero.Rd man/patch_data.Rd man/pipe.Rd man/pluck_latest_ecdc.Rd man/summarise_country_over_limit.Rd man/summarise_covid_global.Rd man/tidy_repro_estimate.Rd man/try_ecdc.Rd vignettes/changepoint.Rmd vignettes/cumulative-cases.Rmd vignettes/instant-reproduction-num.Rmd vignettes/log_inc-log-cuminc-charts.Rmd