plot_pathway: plot NCI RAS Pathway with or without annotation(s)

Description Usage Arguments Author(s) References Examples

View source: R/plot_pathway.R

Description

plot NCI RAS Pathway with or without annotation(s)

Usage

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  plot_pathway(data=NULL, type="no", col.node="blue", 
  col.neg="blue", col.pos="red", bg.neg="blue", bg.pos="red", col.text="black", ...);

Arguments

data

annotation data (matrix or data.frame), column 1: gene symbols and column 2: values

type

type: no or links or nodes

col.node

node color

col.neg

negtive line color

col.pos

positive line color

bg.neg

background negtive line color

bg.pos

background positive line color

col.text

gene color

...

plot options

Author(s)

Ying Hu <yhu@mail.nih.gov>

References

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Examples

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CBIIT-CGBB/NCIRASPathway documentation built on Aug. 18, 2020, 12:40 a.m.