Description Usage Arguments Author(s) References Examples
plot NCI RAS Pathway with or without annotation(s)
1 2 | plot_pathway(data=NULL, type="no", col.node="blue",
col.neg="blue", col.pos="red", bg.neg="blue", bg.pos="red", col.text="black", ...);
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data |
annotation data (matrix or data.frame), column 1: gene symbols and column 2: values |
type |
type: no or links or nodes |
col.node |
node color |
col.neg |
negtive line color |
col.pos |
positive line color |
bg.neg |
background negtive line color |
bg.pos |
background positive line color |
col.text |
gene color |
... |
plot options |
Ying Hu <yhu@mail.nih.gov>
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