ES: calculate enrichment score and p value
In CBIIT-CGBB/OmicPath: OmicPath
ES R Documentation
calculate enrichment score and p value
Description
calculate enrichment score and p value
Usage
ES(db=db, gene=gene, pdffile=pdffile, fdr=T);
Arguments
db
db: a numeric vector of your scores (prevalence of variants) of all genes in your dataset
gene
a vector of genes
pdffile
output pdf file name
fdr
logical: TURE or FALSE, do fdr pvalue
Author(s)
Ying Hu <yhu@mail.nih.gov>
Chunhua Yan <yanch@mail.nih.gov>
References
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Examples
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CBIIT-CGBB/OmicPath documentation built on Sept. 27, 2024, 4:53 a.m.
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| ES | R Documentation |
calculate enrichment score and p value
Description
calculate enrichment score and p value
Usage
ES(db=db, gene=gene, pdffile=pdffile, fdr=T);
Arguments
db |
db: a numeric vector of your scores (prevalence of variants) of all genes in your dataset |
gene |
a vector of genes |
pdffile |
output pdf file name |
fdr |
logical: TURE or FALSE, do fdr pvalue |
Author(s)
Ying Hu <yhu@mail.nih.gov> Chunhua Yan <yanch@mail.nih.gov>
References
##
Examples
##
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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