CBIIT/LDlinkR: Calculating Linkage Disequilibrium (LD) in Human Population Groups of Interest

Provides access to the 'LDlink' API (<https://ldlink.nih.gov/?tab=apiaccess>) using the R console. This programmatic access facilitates researchers who are interested in performing batch queries in 1000 Genomes Project (2015) <doi:10.1038/nature15393> data using 'LDlink'. 'LDlink' is an interactive and powerful suite of web-based tools for querying germline variants in human population groups of interest. For more details, please see Machiela et al. (2015) <doi:10.1093/bioinformatics/btv402>.

Getting started

Package details

MaintainerTimothy A. Myers <myersta@mail.nih.gov>
LicenseGPL (>= 2)
Version1.3.0.9002
URL https://ldlink.nih.gov
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("CBIIT/LDlinkR")
CBIIT/LDlinkR documentation built on April 15, 2024, 3:18 p.m.