Files in CBIIT/rcellminerElasticNet
rcellminerElasticNet

.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
NAMESPACE
R/addPredictorCorrelatedFeatures.R R/cvElasticNet.R R/elasticNet.R R/genFeatureAnnotations.R R/getCvFoldIds.R R/getFdaClinicalTrialNscs.R R/getLmCvFit.R R/multiTaskElasticNet.R R/plotElasticNet.R R/predictWithLinRegModel.R R/searchListOfVectors.R R/selectElasticNetParams.R R/summary.enResults.R R/tic_toc.R R/xValFolds.R README.md inst/analyses/enCvExps.R inst/analyses/enMemUsage.R inst/analyses/makeDrugLists.R inst/analyses/makeEnResultsHeatmap_DEPRECATED.R inst/brew/ElasticNetBatchAnalysisBasic_DEPRECATED.Rmd inst/brew/ElasticNetBatchAnalysisProtein_DEPRECATED.R inst/brew/ElasticNetBatchAnalysis_DEPRECATED.R inst/brew/ElasticNetBatchAnalysis_DEPRECATED.Rmd inst/brew/RunEnAnalysisBasicReport.R inst/brew/findUnfinished.R inst/brew/genEnAnalysisBasicReport.R inst/brew/genSwarmCmd.R inst/brew/getCommonFeatures.R inst/brew/templateBasicBrew.Rmd inst/brew/templateElasticNetBatchAnalysisBasicBrew.Rmd
inst/config/commonFeaturesEn/commonFeatures.txt
inst/config/commonFeaturesEn/config.json
inst/config/commonFeaturesEn/runSwarm.sh
inst/config/fdaClin/config.json
inst/config/fdaClin/runSwarm.sh
inst/config/test/config.json
inst/config/test/runMultipleDrugs.R
inst/config/test/runSwarm.sh
inst/extdata/.Rapp.history
inst/extdata/RunGenOutput.R
inst/extdata/annot_table_cf.html
inst/extdata/annot_table_ct.html
inst/extdata/common_en_annot_table.txt
inst/extdata/common_en_cvresults_cvCorMat.rds
inst/extdata/common_en_cvresults_heatmap.pdf
inst/extdata/common_en_cvresults_heatmap.txt
inst/extdata/common_en_cvresults_table.rds
inst/extdata/common_en_cvresults_table.txt
inst/extdata/common_en_cvresults_vioplot.pdf
inst/extdata/enDrugInfo.txt
inst/extdata/en_annot_table.txt
inst/extdata/en_cvresults_cvCorMat.rds
inst/extdata/en_cvresults_heatmap.pdf
inst/extdata/en_cvresults_heatmap.txt
inst/extdata/en_cvresults_table.rds
inst/extdata/en_cvresults_table.txt
inst/extdata/en_cvresults_vioplot.pdf
inst/extdata/heatmap_cf_pf.html
inst/extdata/heatmap_cf_pt.html
inst/extdata/heatmap_ct_pf.html
inst/extdata/heatmap_ct_pt.html
inst/extdata/partial_common_en_cvresults_heatmap.pdf
inst/extdata/partial_common_en_cvresults_heatmap.txt
inst/extdata/partial_en_cvresults_heatmap.pdf
inst/extdata/partial_en_cvresults_heatmap.txt
inst/extdata/table_cf.html
inst/extdata/table_ct.html
inst/scripts/plotSpecificEnResult.R inst/tests/test_elasticNet.R man/addPredictorCorrelatedFeatures.Rd man/cvElasticNet.Rd man/elasticNet.Rd man/genFeatureAnnotations.Rd man/getCvFoldIds.Rd man/getFdaClinicalTrialNscs.Rd man/getLmCvFit.Rd man/multiTaskElasticNet.Rd man/plotElasticNet.Rd man/predictWithLinRegModel.Rd man/searchListOfVectors.Rd man/selectElasticNetParams.Rd man/summary.enResults.Rd man/tic.Rd man/toc.Rd man/xValFolds.Rd
rcellminerElasticNet.Rproj
vignettes/checkEnData.Rmd vignettes/makeEnResultsHeatmap.Rmd vignettes/makeEnResultsTable.Rmd vignettes/makePredictorAnnotTable.Rmd
CBIIT/rcellminerElasticNet documentation built on Sept. 8, 2020, 6:21 p.m.