inst/brew/getCommonFeatures.R
In CBIIT/rcellminerElasticNet: rcellminerElasticNet
library(rcellminer)
molDB <- getMolDataMatrices()
dataSets <- c("swa", "exp", "mut")
molDB <- molDB[dataSets]
molDBFeatures <- lapply(molDB, function(x) {unname(removeMolDataType(rownames(x)))})
commonFeatures <- Reduce(intersect, molDBFeatures)
write.table(commonFeatures, file=file.path(.lmp, "dockerfiles", "swathAnalysis", "biowulf", "commonFeatures.txt"),
quote=FALSE, row.names=FALSE, col.names="commonFeatures")
CBIIT/rcellminerElasticNet documentation built on Sept. 8, 2020, 6:21 p.m.
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library(rcellminer)
molDB <- getMolDataMatrices()
dataSets <- c("swa", "exp", "mut")
molDB <- molDB[dataSets]
molDBFeatures <- lapply(molDB, function(x) {unname(removeMolDataType(rownames(x)))})
commonFeatures <- Reduce(intersect, molDBFeatures)
write.table(commonFeatures, file=file.path(.lmp, "dockerfiles", "swathAnalysis", "biowulf", "commonFeatures.txt"),
quote=FALSE, row.names=FALSE, col.names="commonFeatures")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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