Man pages for CC-HIC/inspectEHR
Data Quality Reporting for CC-HIC
| analyze_bg | Analyze Blood Gases |
| autoplot.date_1d | Plot Datetime |
| autoplot.datetime_1d | Plot Datetime |
| autoplot.heat_cal | Plot Calendar Heatmap |
| autoplot.integer_1d | Plot Integer |
| autoplot.integer_2d | Plot Integer |
| autoplot.real_1d | Plot Real Valued Dataitem |
| autoplot.real_2d | Plot Real |
| autoplot.string_1d | Plot String |
| autoplot.string_2d | Plot String |
| autoplot.time_1d | Plot Time |
| characterise_episodes | Characterise Episodes |
| characterise_spells | Characterise Spells |
| clean | Clean Table |
| clean_column | Clean Column |
| connect | Establishes a connection to the database |
| coverage | verify Event Plausibility - Coverage Checks (S3 Generic) |
| create_calendar_template | Calendar Template for Count Data |
| create_grid | Calendar Gridlines |
| cross_entropy | Calculate Cross Entropy |
| daily_admissions | Daily Admissions for each Site |
| daily_events | Daily Events for HIC Data item by Site |
| episode_varacity | Summarise Non-Verifiable Episodes |
| event_occurrances | Event Occurrances for each Site |
| expand_missing | Fill in 2d Table to make a Sparse Table |
| extract | Extract NHIC Events |
| extract_1d | Extract 1d Values |
| extract_2d | Extract 2d Values |
| extract_demographics | Extract 1d data from CC-HIC |
| extract_timevarying | Extract & Reshape Timevarying Dateitems |
| find_first_sunday | Find First Sunday |
| generate_icnarc | Generate ICNARC Diagnostic Codes |
| generate_nhs | Generate NHS Numbers |
| generate_post_code | Generate Post Code |
| inspectEHR | inspectEHR |
| inv_logit | Inverse Logistic Function |
| ks_test | Pairwise Kolmogorov-Smirnov Distance |
| make_core | Core table |
| make_dict | Determine dimentionality of Events |
| make_heatcal | Make a heat_cal object |
| make_reference | Make reference Table |
| plot_ecdf | Plot CC-HIC Data item eCDF |
| plot_hist | Plot Histogram |
| plot_ks | Plot Kolmogorov-Smirnov Test |
| plot_patient | Plot Patient |
| plot_periodicity | Plot periodicity |
| process_item_timestamp | Process episode with a timestamp |
| qref | Data quality reference table for CC-HIC. Version 1.1 |
| report | CC-HIC Data Quality Report |
| report_cases_daily | Reports Case Numbers according to day |
| resolve_date_time | Resolve DateTime |
| retrieve_tables | Retrieve Database Tables |
| round_any | Round any |
| summarise_verification | Collate and Summarise Verification Information |
| sync | Synchronise Project with IDHS |
| theme_cchic | CC-HIC ggplot2 Theme |
| unit_admissions | Report Admission Numbers for each Unit |
| verify_bounds | verify Event Plausibility - Boundary Checks (S3 Generic) |
| verify_bounds_2d | verify boundaries of 2d data items |
| verify_chronology | Verify Chronology |
| verify_complete | verify Completeness |
| verify_duplicate | verify Event Plausibility - Duplication Checks (S3 Generic) |
| verify_episodes | Verify Episodes |
| verify_event | Verify CC-HIC Events |
| verify_events | Verify CC-HIC Data |
| verify_icnarc | Varify ICNARC Diagnostic Code |
| verify_nhs | Verify NHS Numbers |
| verify_periodicity | verify Event Plausibility - Periodicity Checks (S3 Generic) |
| verify_periodicity_generic | verify periodicity of 2d class |
| verify_post_code | Verify Post Code |
| verify_range | verify Event Plausibility - Range Checks (S3 Generic) |
| verify_range.date_1d | Range Checks - Dates |
| verify_range.datetime_1d | Range Checks - Datetimes |
| verify_range_numeric | Range Checks - Numeric |
| verify_range_string | Range Checks - String |
| verify_range.time_1d | Range Checks - Times |
| weekly_admissions | Report Weekly Admissions |
