Description Usage Arguments Details
Produce a data quality report for CC-HIC. This wraps all other functions as necessary to evaluate the whole database in one sweep. This can take some time!
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| database | the database name for connection | 
| username | the database username | 
| password | the database password | 
| host | the database server host IP address | 
| port | the database port number | 
| sqlite_file | the filename for the sqlite database (if using it) | 
| output_folder | the path name for output files | 
| write_plots | true/false to output plots. Otherwise only data processing takes place, which can be considerably quicker. | 
| generate_report | triggers the build of the markdown report | 
Specify the output folder in output_folder.
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