webscrape_icd: ICD Code Web Scraper

In CDCgov/Rnssp: A Signature R package for the National Syndromic Surveillance Program (NSSP)

ICD Code Web Scraper

Description

Function to web scrape ICD discharge diagnosis code sets from the CDC FTP server (for ICD-10) or CMS website (for ICD-9). If pulling ICD-10 codes, by default the function will search for the most recent year's code set publication by NCHS. Users can specify earlier publication years back to 2019 if needed. The ICD-9 option will only web scrape the most recent, final ICD-9 code set publication (2014) from the CMS website. This function will return an error message if the FTP server or CMS website is unresponsive or if a timeout of 60 seconds is reached. The result is a dataframe with 3 fields: code, description, and set (ICD version concatenated with year). Codes are standardized to upper case with punctuation and extra leading/tailing white space removed to enable successful joining.

Usage

webscrape_icd(icd_version = "ICD10", year = NULL, quiet = FALSE)

Arguments

icd_version	A character value of either "icd10", "ICD10", "icd9", or "ICD9" to specify ICD version
year	A numeric integer indicating the year of desired ICD-10 code set. Defaults to NULL to pull the most recent year's publication.
quiet	logical. If TRUE, suppress status messages (if any), and the progress bar.

Value

A dataframe

References

• CDC NCHS FTP Server Location for Published ICD-10 Code Sets

• CMS Website for Published ICD-9 Code Sets

Examples

# Example 1
icd9_2014 <- webscrape_icd(icd_version = "ICD9")
head(icd9_2014)

# Example 2
icd10_2024 <- webscrape_icd(icd_version = "ICD10", year = 2024)
head(icd10_2024)

# Example 3
icd10_2023 <- webscrape_icd(icd_version = "ICD10", year = 2023)
head(icd10_2023)

CDCgov/Rnssp documentation built on May 12, 2024, 1:32 a.m.