getaidcid: Get Assay ID Based on Compound Activity
In CDK-R/rpubchem: An Interface to the PubChem Collection
Description
Usage
Arguments
Value
Author(s)
See Also
Description
This function allows you to identify PubChem assays in which a
compound, specified by CID, has been tested in. The method uses
the PubChem Power User Gateway (PUG) and as a result can be slow.
The function can be used to identify assays in which the CID is
active, inactive or simply the assays in which it
has been tested.
Usage
1
get.aid.by.cid(cid, type="tested", quiet=TRUE)
Arguments
cid
A single compound ID
type
What type of query should be performed. Valid values are
'active', 'inactive', 'tested'
quiet
If FALSE, output is verbose
Value
If the type argument was one of 'active', 'inactive', or
'tested' a numeric vector of assay IDs.
In case an invalid CID was specified or the query failed, NULL is returned.
Author(s)
Rajarshi Guha rajarshi.guha@gmail.com
See Also
CDK-R/rpubchem documentation built on Nov. 6, 2019, 3:59 a.m.
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Description Usage Arguments Value Author(s) See Also
Description
This function allows you to identify PubChem assays in which a compound, specified by CID, has been tested in. The method uses the PubChem Power User Gateway (PUG) and as a result can be slow.
The function can be used to identify assays in which the CID is active, inactive or simply the assays in which it has been tested.
Usage
1 | get.aid.by.cid(cid, type="tested", quiet=TRUE)
|
Arguments
cid |
A single compound ID |
type |
What type of query should be performed. Valid values are 'active', 'inactive', 'tested' |
quiet |
If |
Value
If the type argument was one of 'active', 'inactive', or
'tested' a numeric vector of assay IDs.
In case an invalid CID was specified or the query failed, NULL is returned.
Author(s)
Rajarshi Guha rajarshi.guha@gmail.com
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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