inst/markdown/ici_immunefeatures.markdown
In CRI-iAtlas/iatlas-app: What the Package Does (One Line, Title Case)
This displays the value of immune readouts by sample group. Select a variable of interest to see the distribution of values within sample groups of the ICI Datasets selected in ICI Cohort Selection. Samples can be further divided into an additional sub-group based on the availability of those groups for each dataset. Use the plot parameters to adjust the type of plot and choice of scale. A table with the result of statistical tests comparing all pairwise combinations of groups is provided at the bottom of the page. For an A vs B comparison, a positive t-statistics or Wilcox statistics corresponds to an elevated value in the A group over group B (Mean value in A greater than mean in B). The table also includes a comparison of the log2 fold change of groups.
CRI-iAtlas/iatlas-app documentation built on Feb. 7, 2025, 9:02 p.m.
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This displays the value of immune readouts by sample group. Select a variable of interest to see the distribution of values within sample groups of the ICI Datasets selected in ICI Cohort Selection. Samples can be further divided into an additional sub-group based on the availability of those groups for each dataset. Use the plot parameters to adjust the type of plot and choice of scale. A table with the result of statistical tests comparing all pairwise combinations of groups is provided at the bottom of the page. For an A vs B comparison, a positive t-statistics or Wilcox statistics corresponds to an elevated value in the A group over group B (Mean value in A greater than mean in B). The table also includes a comparison of the log2 fold change of groups.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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