add_datatable: Add Data Table

In CVPIA-OSC/EMLaide: Provides functions for building EML metadata for EDI's data repository

Add Data Table

Description

Adds the data table elements to a dataset list according to EML standards.

Usage

add_datatable(parent_element, datatable_metadata)

Arguments

parent_element	A list representing the EML project or dataset.
datatable_metadata	A named list or dataframe containing datatable metadata elements (filepath, attribute_info, datatable_description, and additional optional columns): see create_datatable

Value

The dataset list or project with datatable information appended.

Examples

datatable_metadata <- dplyr::tibble(filepath = c(system.file("extdata", "Banet-Example", "data", "enclosure-study-growth-rate-data.csv", 
                                                             package = "EMLaide", mustWork = TRUE), 
                                                             system.file("extdata", "Banet-Example", "data", "enclosure-study-gut-contents-data.csv", 
                                                             package = "EMLaide", mustWork = TRUE)), 
                                     attribute_info = c(system.file("extdata", "Banet-Example", "metadata", "enclosure-study-growth-rates-metadata.xlsx", 
                                                             package = "EMLaide", mustWork = TRUE), 
                                     system.file("extdata", "Banet-Example", "metadata", "enclosure-study-gut-contents-metadata.xlsx", 
                                                             package = "EMLaide", mustWork = TRUE)),
                                     datatable_description = c("Growth Rates - Enclosure Study",
                                                               "Gut Contents - Enclosure Study"))
## Not run: 
dataset <- list() %>%
    add_datatable(datatable_metadata)
dataset

## End(Not run)

CVPIA-OSC/EMLaide documentation built on Aug. 25, 2023, 8:53 a.m.