Man pages for CWetzel/XSSS
Extended Simple Stock Synthesis
| changeDepl | Changes the depletion value for the depletion year in the... |
| changeH | Changes the steepness value in the control file |
| changeM | Changes the natural mortality value for female and male fish... |
| create.Plots | Changes the natural mortality value for female and male fish... |
| define_matrix | Create the quant matrix |
| fit.mvt | This function calculates the covariance between the... |
| get.new.posterior | Calculate the updated posterior probability for the good... |
| get.new.wghts | Calculate the new sampling weights based on the likelihood,... |
| get.prior | Calculate the prior probabilities for the original good... |
| getQuant | Function to pull quantities |
| get.seed | Seed Function - this function will generate a seed if one is... |
| matchfun | Function to pull quantities |
| move.files.fxn | Function that moves and saves the needed files sim.num... |
| pars.truncbeta | this function gets parameters of standard beta... |
| rbeta.ab | Beta Distribution for steepness |
| RepSumFxn | Get Final Run Model Output |
| SSS.ais.fxn | This the main AIS code The code will run the initial N sample... |
