get_Budding_History: Extract budding history from simulations
In Caetanods/buddPhy: Trait Evolution and Budding Speciation
Description
Usage
Arguments
Value
View source: R/simMK_budding.R
Description
This function can be used to extract the history of budding events across the branches and nodes of the tree.
Usage
1
get_Budding_History(sim)
Arguments
sim
A simulation object generated with 'sim_Mk_budding_exp', 'sim_Mk_trace_history', 'sim_BM_budding_exp', or 'sim_BM_trace_history'.
Value
a list. budd_nodes are the nodes representing budding speciation events. budd_edges is an index, in the same order of phy$edge, selecting all branches belonging to mother lineages. A mother lineage is a lineage that survived one or more speciation events (because of budding).
Caetanods/buddPhy documentation built on Oct. 12, 2021, 12:14 p.m.
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Description Usage Arguments Value
View source: R/simMK_budding.R
Description
This function can be used to extract the history of budding events across the branches and nodes of the tree.
Usage
1 | get_Budding_History(sim)
|
Arguments
sim |
A simulation object generated with 'sim_Mk_budding_exp', 'sim_Mk_trace_history', 'sim_BM_budding_exp', or 'sim_BM_trace_history'. |
Value
a list. budd_nodes are the nodes representing budding speciation events. budd_edges is an index, in the same order of phy$edge, selecting all branches belonging to mother lineages. A mother lineage is a lineage that survived one or more speciation events (because of budding).
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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