survival_statistics: survival_statistics

View source: R/survival_statistics.R

survival_statisticsR Documentation

survival_statistics

Description

Provides non-parametric estimate of marginal relative survival, which under assumptions can be interpreted as marginal net survival. survival_statistics() is calling the Stata stnet program, using the Pohar Perme estimator with Brenner weighting to estimate age-standardized net survival.

Detailed documentation is available at https://github.com/CancerRegistryOfNorway/NORDCAN/wiki/nordcansurvival

Usage

survival_statistics(
  stata_exe_path = NULL,
  infile,
  lifetable,
  outfile = "survival_statistics",
  estimand = "netsurvival"
)

Arguments

stata_exe_path

This is set in the NORDCAN settings by default

infile

path to a dataset of cancer records

lifetable

(mandatory, default by NORDCAN system)

outfile

path where to write result file. The outfile must be a set of

  • survival_statistics_agestandardised_survivaltime_05_period_05

  • survival_statistics_agestandardised_survivaltime_05_period_10

  • survival_statistics_agestandardised_survivaltime_10_period_05

  • survival_statistics_agestandardised_survivaltime_10_period_10

  • survival_statistics_agespecific_survivaltime_05_period_05

  • survival_statistics_agespecific_survivaltime_05_period_10

  • survival_statistics_agespecific_survivaltime_10_period_05

  • survival_statistics_agespecific_survivaltime_10_period_10

and it was set up by the option output_objects of nordcanepistats::nordcan_statistics_tables

estimand

defaults to netsurvival the only option so far

Value

survival analysis output in .csv (UTF-8) and .dta format.


CancerRegistryOfNorway/stnetcall documentation built on June 15, 2025, 11:36 a.m.