API for Cao-lab-zcmu/MCnebula
MCnebula algorithm integration in R
| Global functions | |
|---|---|
| .meta_find_and_sort | Source code |
| .meta_mutate_grep_get | Source code |
| annotate_child_nebulae | Man page Source code |
| annotate_node | Source code |
| auto_classyfire | Source code |
| base_pubchem_curl_inchikey | Source code |
| base_pubchem_get_synonyms | Source code |
| base_read_cairo | Source code |
| base_vis_c_nebula | Source code |
| base_vis_nodes | Source code |
| base_vis_p_nebula | Source code |
| base_vis_structure | Source code |
| batch_get_classification | Source code |
| batch_mode_nodes | Source code |
| batch_mode_structure | Source code |
| better_vis_nebula | Source code |
| build_classes_tree_list | Man page Source code |
| by_group_as_list | Source code |
| by_group_as_list_select | Source code |
| call_fun_mc.space | Source code |
| check_dir | Source code |
| class_retrieve | Source code |
| collate_ppcp | Man page Source code |
| collate_structure | Man page Source code |
| combn_edge | Source code |
| couple_ms2_compare | Source code |
| df_get_structure | Source code |
| edges_cut_off | Source code |
| escape_ch | Source code |
| extract_rdata_list | Source code |
| format_quant_table | Source code |
| fun_filter_via_struc_score | Source code |
| gather_subview | Source code |
| generate_child_nebulae | Man page Source code |
| generate_parent_nebula | Man page Source code |
| get_formula | Man page Source code |
| get_mc.global_meta | Source code |
| get_nebula_structure_candidates | Source code |
| get_parent_class | Source code |
| get_ppcp | Man page Source code |
| get_precursor_mass | Source code |
| get_structure | Man page Source code |
| grep_element | Source code |
| grep_id | Source code |
| grid_child_nebula | Source code |
| grouping_vec2list | Source code |
| identical_filter | Source code |
| initialize_mcnebula | Man page Source code |
| mc.blank_theme | Source code |
| merge_class_ppcp | Source code |
| merge_image | Source code |
| method_formula_based_spec_compare | Man page Source code |
| method_pick_formula_excellent | Man page Source code |
| method_summarize_nebula_class | Man page Source code |
| method_summarize_nebula_index | Man page Source code |
| method_summarize_target_index | Source code |
| method_target_spec_compare | Source code |
| molconvert_structure | Source code |
| mutate2_get_structure | Source code |
| mutate_get_parent_class | Source code |
| nebula_get_candidate | Source code |
| nebula_re_rank | Man page Source code |
| packing_as_rdata_list | Source code |
| precursor_mass_diff | Source code |
| pubchem_curl_inchikey | Source code |
| pubchem_get_synonyms | Source code |
| read_as_spectrum2 | Source code |
| read_fpt | Source code |
| read_tsv | Source code |
| rename_file | Source code |
| revise_MCn_formula_set | Source code |
| revise_MCn_structure_set | Source code |
| rm_mc.set | Source code |
| separate_nebula | Source code |
| set_reference_compound | Source code |
| smiles_to_sdfset | Source code |
| stack_sum | Source code |
| vis_via_molconvert | Source code |
| vis_via_molconvert_nebulae | Source code |
| visualize_child_nebulae | Man page Source code |
| visualize_nebula | Man page Source code |
| visualize_parent_nebula | Man page Source code |
| write_tsv | Source code |
