BubbleEnrich: Bubble Graph of Disease Phentype Enrichment Results
In CathyCha/BubbleEnrich: Bubble Graph for disease phenotyp enrichment results
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
This function gets a ranked gene set of interest with related phenotypes and outputs a
bubble graph with bubble diameters correlated to the significance of the phenotype to the
gene set.
Usage
1
BubbleEnrich(geneList = NULL)
Arguments
geneList
A numeric, named vector, sorted in descending order
Value
A ggplot plot
Author(s)
Cathy Cha (aut)
References
Guangchuang Yu, Li-Gen Wang, Yanyan Han and Qing-Yu He. clusterProfiler: an R package
for comparing biological themes among gene clusters. OMICS: A Journal of Integrative
Biology 2012, 16(5):284-287
Examples
1
2
3
4
5
## Not run:
data(geneList, package="DOSE")
BubbleEnrich(geneList)
## End(Not run)
CathyCha/BubbleEnrich documentation built on Dec. 8, 2019, 7:37 a.m.
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Description Usage Arguments Value Author(s) References Examples
Description
This function gets a ranked gene set of interest with related phenotypes and outputs a bubble graph with bubble diameters correlated to the significance of the phenotype to the gene set.
Usage
1 | BubbleEnrich(geneList = NULL)
|
Arguments
geneList |
A numeric, named vector, sorted in descending order |
Value
A ggplot plot
Author(s)
Cathy Cha (aut)
References
Guangchuang Yu, Li-Gen Wang, Yanyan Han and Qing-Yu He. clusterProfiler: an R package for comparing biological themes among gene clusters. OMICS: A Journal of Integrative Biology 2012, 16(5):284-287
Examples
1 2 3 4 5 | ## Not run:
data(geneList, package="DOSE")
BubbleEnrich(geneList)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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