plot_DT: Plot the predictions of a DT model

Description Usage Arguments References

View source: R/plot_DT.R

Description

This function is a wrapper around the ggradar function and produces radar plot for the DT model predictions.

Usage

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plot_DT(plot.data, axis.labels = colnames(plot.data)[-1],
  grid.line.width = 0.5, gridline.min.colour = "grey",
  gridline.mid.colour = "#007A87", gridline.max.colour = "grey",
  grid.label.size = 7, axis.label.offset = 1.15, axis.label.size = 8,
  axis.line.colour = "grey", group.line.width = 1.5,
  group.point.size = 6, background.circle.colour = "#D7D6D1",
  background.circle.transparency = 0.2, plot.legend = if
  (nrow(plot.data) > 1) TRUE else FALSE, legend.title = "",
  plot.title = "", legend.text.size = grid.label.size, byRow = FALSE)

Arguments

plot.data

dataframe comprising samples in rows and DT model predictions in columns (as returned by run_DT)

axis.labels

names of axis labels if other than column names supplied via plot.data

grid.line.width, gridline.min.colour, gridline.mid.colour, gridline.max.colour

controls for the appearance of some aspects the 'minimum', 'average' and 'maximum' grid lines.

axis.label.offset

vertical displacement of axis labels from maximum grid line, measured relative to circle diameter

axis.label.size, grid.label.size, legend.text.size

text size

axis.line.colour

colour of the axes

group.line.width, group.point.size

controls for the appearance of some aspects of the sample lines

background.circle.colour, background.circle.transparency

controls for the appearance of background circle

plot.legend

logical, does the legend be printed or not

legend.title, plot.title

titles

byRow

logical, should one radar plot be returned for each sample ID

References

script adapted from https://github.com/ricardo-bion/ggradar/blob/master/R/ggradar.R


CedricMondy/ecodiag documentation built on Nov. 7, 2018, 2:30 p.m.