plot_DT: Plot the predictions of a DT model

In CedricMondy/ecodiag: Build Standardized Diagnostic Tool Models

Description

This function is a wrapper around the ggradar function and produces radar plot for the DT model predictions.

Usage

plot_DT(plot.data, axis.labels = colnames(plot.data)[-1],
  grid.line.width = 0.5, gridline.min.colour = "grey",
  gridline.mid.colour = "#007A87", gridline.max.colour = "grey",
  grid.label.size = 7, axis.label.offset = 1.15, axis.label.size = 8,
  axis.line.colour = "grey", group.line.width = 1.5,
  group.point.size = 6, background.circle.colour = "#D7D6D1",
  background.circle.transparency = 0.2, plot.legend = if
  (nrow(plot.data) > 1) TRUE else FALSE, legend.title = "",
  plot.title = "", legend.text.size = grid.label.size, byRow = FALSE)

Arguments

plot.data	dataframe comprising samples in rows and DT model predictions in columns (as returned by run_DT)
axis.labels	names of axis labels if other than column names supplied via plot.data
grid.line.width, gridline.min.colour, gridline.mid.colour, gridline.max.colour	controls for the appearance of some aspects the 'minimum', 'average' and 'maximum' grid lines.
axis.label.offset	vertical displacement of axis labels from maximum grid line, measured relative to circle diameter
axis.label.size, grid.label.size, legend.text.size	text size
axis.line.colour	colour of the axes
group.line.width, group.point.size	controls for the appearance of some aspects of the sample lines
background.circle.colour, background.circle.transparency	controls for the appearance of background circle
plot.legend	logical, does the legend be printed or not
legend.title, plot.title	titles
byRow	logical, should one radar plot be returned for each sample ID

References

script adapted from https://github.com/ricardo-bion/ggradar/blob/master/R/ggradar.R

CedricMondy/ecodiag documentation built on May 10, 2019, 3:14 a.m.