heatmapHIV: Produce a heatmap

In CharlesJB/heatmapHIV: Produce heatmaps for RNA-Seq HIV data

Description

Produce a heatmap

Usage

heatmapHIV(counts, gene_list, filter = NULL, heatmap = TRUE)

Arguments

counts	The filename of the RPKM or raw count matrix.
gene_list	The filename of the gene list to subset the matrix before producing the heatmap.
filter	Order on a subset of column matching value of filter. When NULL, a clustering of the columns will be done instead. Default: NULL.
heatmap	Should the function produce an heatmap. Default: TRUE

Value

Invisibly return the matrix used to produce the heatmap.

Examples

## Not run: 
heatmapHIV("RPKM.txt", "gene_list.txt")

## End(Not run)

CharlesJB/heatmapHIV documentation built on May 6, 2019, 9:58 a.m.