Description Usage Arguments Value Examples
Produce a manhattan plot.
1 2 |
gr_snps |
A |
title |
The title of the plot. |
pvalue |
The name of the column to use as pvalue. Default: NULL (the first numerical metadata column will be used) |
status |
Name of the column for the SNP status (Genotype or Imputed) |
r2 |
The name of the column to use for showing r2. Default: NULL. |
geno_ld |
The file *.geno.ld produced by 'vcftools' or a
|
extra_ggplot2 |
Extra modifications to add to the graph. Must be valid ggplot2 expressions. |
corresponding to the input file table.
1 | dataset <- load_dataset()
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