This package encapsulate X!Tandem in R. In its most basic functionality, this package allows to call tandem(input) from R, just as tandem.exe /path/to/input.xml would be used to run X!Tandem from the command line. Classes are also provided for taxonomy and parameters objects and methods are provided to convert xml files to R objects and vice versa. This package is the first step in an attempt to provide a reliable worflow for proteomics analysis in R.
|Author||Frederic Fournier <[email protected]>, Charles Joly Beauparlant <[email protected]>, Rene Paradis <[email protected]>, Arnaud Droit <[email protected]>|
|Bioconductor views||MassSpectrometry Proteomics|
|Maintainer||Frederic Fournier <[email protected]>|
|License||Artistic-1.0 | file LICENSE|
|Package repository||View on GitHub|
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