CharlesJB/rTANDEM: Encapsulate X!Tandem in R.
Version 1.1.4

This package encapsulate X!Tandem in R. In its most basic functionality, this package allows to call tandem(input) from R, just as tandem.exe /path/to/input.xml would be used to run X!Tandem from the command line. Classes are also provided for taxonomy and parameters objects and methods are provided to convert xml files to R objects and vice versa. This package is the first step in an attempt to provide a reliable worflow for proteomics analysis in R.

Getting started

Package details

AuthorFrederic Fournier <[email protected]>, Charles Joly Beauparlant <[email protected]>, Rene Paradis <[email protected]>, Arnaud Droit <[email protected]>
Bioconductor views MassSpectrometry Proteomics
MaintainerFrederic Fournier <[email protected]>
LicenseArtistic-1.0 | file LICENSE
Version1.1.4
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("CharlesJB/rTANDEM")
CharlesJB/rTANDEM documentation built on June 1, 2017, 11:12 p.m.