API for ChenMengjie/SynthEx
A synthetic normal approach to call CNAs from sequencing data.

Global functions
CallWholeGenomeDoubling Source code
Lookup Source code
SynthExPipeline Source code
SynthExUserGuide Source code
SynthExcorrectBias Source code
WGS_calratio Source code
WGS_normalization Source code
bic.rss Source code
calratioWGS Source code
chr.tosegment Source code
chromosomeView Source code
correctBias Source code
correctBypurity Source code
createBins Source code
createCentromereBins Source code
createSegments Source code
createTargetBins Source code
create_synthetic_library Source code
create_synthetic_normal Source code
denoise Source code
groupCNplots Source code
hello Man page
larsCBS Source code
larsCBSsegment Source code
merge_synthetic_library Source code
normalization Source code
purityEstimate Source code
selection.default Source code
singleCNreport Source code
synthetic_WGS_calratio Source code
synthetic_correctBias_allpossibility Source code
synthetic_correctBias_allsamples Source code
synthetic_correctBias_nearsamples Source code
synthetic_nearsamples_WGS_calratio Source code
tosegment Source code
ChenMengjie/SynthEx documentation built on March 21, 2018, 6:42 p.m.