API for ChenMengjie/VIPER
VIPER: a variability-preserving imputation method for single cell RNA sequencing data

Global functions
DESeq2 Source code
EM_discrete_mix Source code
EM_discrete_mix_easy Source code
PlotCV Source code
PlotGeneMatrix Source code
PlotR2 Source code
PlotWeights Source code
PredictCell Source code
PredictGene Source code
VIPER Man page Source code
alpha_optim Source code
calculate_weights Source code Source code
edgeR Source code
edgeR_others Source code
fitting_lasso Source code Source code
fitting_lasso_return_r2 Source code
gradient_all_combined_mix Source code
gradient_all_mix Source code
gradient_descent_mix Source code
gradient_descent_mix_easy Source code
imputation_by_samples_posterior_expectation Source code
imputation_by_samples_posterior_expectation_simplified Source code
log_factorial Source code
log_factorial_calculated Source code
log_poisson_likelihood_mix Source code
multiplot Source code
reweighting_sum_new_posterior_expectation_C Source code
reweighting_sum_new_posterior_expectation_simplified_C Source code
take_exp_weight Source code
test_stepsize_for_mu_mix Source code
test_stepsize_for_psi_mix Source code
ChenMengjie/VIPER documentation built on Nov. 19, 2018, 7:57 a.m.