Files in ChiungTingWu/ncGTW
Alignment of LC-MS Profiles by Neighbor-wise Compound-specific Graphical Time Warping with Misalignment Detection
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/RcppExports.R
R/XCMSedited.R
R/allClasses.R
R/allGenerics.R
R/allMethods.R
R/loadProfile.R
R/misalignDetect.R
R/ncGTW.R
R/ncGTWalign.R
R/ncGTWgraph.R
R/ncGTWplot.R
R/ncGTWutility.R
R/ncGTWwarp.R
R/xcmsExamples.R
README.md
data/xcmsExamples.rda
img/XCMS_ncGTW.png
img/mis_det.png
img/ncGTW.png
inst/CITATION
inst/NEWS
inst/extdata/example1.mzxml
inst/extdata/example10.mzxml
inst/extdata/example11.mzxml
inst/extdata/example12.mzxml
inst/extdata/example13.mzxml
inst/extdata/example14.mzxml
inst/extdata/example15.mzxml
inst/extdata/example16.mzxml
inst/extdata/example17.mzxml
inst/extdata/example18.mzxml
inst/extdata/example19.mzxml
inst/extdata/example2.mzxml
inst/extdata/example20.mzxml
inst/extdata/example3.mzxml
inst/extdata/example4.mzxml
inst/extdata/example5.mzxml
inst/extdata/example6.mzxml
inst/extdata/example7.mzxml
inst/extdata/example8.mzxml
inst/extdata/example9.mzxml
inst/script/Generation_of_the_example_data.txt
man/adjustRT.Rd
man/compCV.Rd
man/fillPeaksChromPar.Rd
man/getPeaksncGTW.Rd
man/loadProfile.Rd
man/meanCorOl.Rd
man/misalignDetect.Rd
man/ncGTW-package.Rd
man/ncGTWalign.Rd
man/ncGTWinput-accessors.Rd
man/ncGTWinput-class.Rd
man/ncGTWoutput-accessors.Rd
man/ncGTWoutput-class.Rd
man/ncGTWparam-class.Rd
man/ncGTWwarp-accessors.Rd
man/ncGTWwarp-class.Rd
man/plotGroup.Rd
man/xcmsExamples.Rd
src/.gitignore
src/RcppExports.cpp
src/graphCut.cpp
src/ibfs.cpp
src/ibfs.h
src/instances.h
tests/testthat.R
tests/testthat/test_ncGTW.R
vignettes/.gitignore
vignettes/biomed-central.csl
vignettes/ncGTW.Rmd
vignettes/references.bib
